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GenomeQuest 6 introduces a new category of product called sequence data management (SDM). It offers new functionality, accessibility, and methods to genomics researchers and organizations seeking to fundamentally improve the performance of their discovery process and broadly prepare for next generation sequencing (NGS).

Sequence Data Management

GenomeQuest SDM

GenomeQuest offers researchers powerful discovery tools and complete management of their sequence data.

Key capabilities include:

• A browser-based, data management dashboard
• Sequence assembly and annotation
• Data mining on sequence alignments and text annotations
• Data set joining (mining across multiple experiments)
• Result saving/re-mining (interactive discovery)
• Data/result sharing with colleagues through dashboards
• Data export to other discovery tools, including desktop visualization
• Single-point-of-access to reference databases
• Support for all popular sequencing machines, including 454, Illumina, and SOLiD
• IP solutions
  
• Easy configuration, and
• Built-in workflows for common discovery challenges.

GenomeQuest workflows package all bioinformatics details -- including the reference data, the queries, the algorithms, the interfacing to third party tools, the compute environment, and the results -- into an easy-to-use upload/compute/analyze loop for the researcher.

Workflows are available for digital gene expression, antibody optimization, variant detection, rapid annotation for metagenomics, BLAST search, and patent search.

GenomeQuest is commercially available for use by researchers online -- for fast startup and low cost of ownership, or fully deployed inside their firewall -- for maximum control and integration.

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